STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2545Hypothetical protein; KEGG: DSG4; desmoglein 4; K07599 desmoglein 4. (166 aa)    
Predicted Functional Partners:
Xcel_2131
Hypothetical protein.
  
     0.733
Xcel_1174
Hypothetical protein.
  
     0.684
Xcel_2407
Hypothetical protein; KEGG: ank:AnaeK_0563 thermosensitive mutation transmembrane protein, SuhR.
  
     0.673
Xcel_2544
Hypothetical protein.
 
     0.669
Xcel_2929
KEGG: similar to 5-amp-activated protein kinase, beta subunit.
  
     0.622
Xcel_0323
KEGG: asa:ASA_2910 flp pilus assembly protein FlpE.
  
     0.556
Xcel_0005
PFAM: protein of unknown function DUF721; KEGG: protein of unknown function DUF721.
  
     0.544
Xcel_0326
PFAM: type II secretion system protein; KEGG: mno:Mnod_2571 type II secretion system protein.
  
     0.539
Xcel_1554
KEGG: sus:Acid_5280 glucose-6-P dehydrogenase subunit-like protein.
  
     0.498
Xcel_0974
KEGG: hypothetical protein.
  
     0.488
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.