STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2547KEGG: hypothetical protein. (538 aa)    
Predicted Functional Partners:
Xcel_2548
KEGG: sus:Acid_6302 glycosyl transferase family protein.
 
    0.956
Xcel_2424
KEGG: similar to hedgehog protein.
  
     0.766
Xcel_2819
Hypothetical protein; KEGG: mch:Mchl_4744 putative superfamily I DNA and RNA helicase protein.
  
    0.753
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
    0.743
Xcel_0736
KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
  
     0.699
Xcel_1312
Hypothetical protein; KEGG: met:M446_5885 adenylate/guanylate cyclase.
 
     0.668
Xcel_1993
Hypothetical protein; KEGG: acp:A2cp1_0462 exonuclease SbcC.
  
     0.661
Xcel_2503
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
  
     0.651
Xcel_2425
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
  
     0.635
Xcel_2423
Hypothetical protein; KEGG: vco:VC0395_A1354 HlyD family secretion protein.
  
     0.629
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.