STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2548KEGG: sus:Acid_6302 glycosyl transferase family protein. (1134 aa)    
Predicted Functional Partners:
Xcel_2547
KEGG: hypothetical protein.
 
    0.956
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.756
Xcel_1788
PFAM: protein of unknown function DUF58; KEGG: mxa:MXAN_2474 hypothetical protein.
  
     0.662
Xcel_1497
Hypothetical protein; KEGG: GK24882 gene product from transcript GK24882- RA.
  
     0.633
whiB-4
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.607
Xcel_0699
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_1921 protein of unknown function DUF214.
  
     0.554
Xcel_2218
Acetyltransferase; KEGG: scl:sce0310 acetyltransferase.
  
     0.535
Xcel_2546
PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_0850 glycosyl transferase family 2.
       0.527
Xcel_2424
KEGG: similar to hedgehog protein.
  
     0.526
Xcel_3226
KEGG: dac:Daci_3662 Ig family protein.
  
     0.520
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.