STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2554PFAM: glycosyl transferase family 2; KEGG: amc:MADE_02590 glycosyl transferase, family 2. (385 aa)    
Predicted Functional Partners:
Xcel_2553
KEGG: rru:Rru_A2121 hypothetical protein.
 
   0.905
Xcel_2555
Hypothetical protein; KEGG: xcv:XCV1252 putative glycosyltransferase.
  
  
 0.810
Xcel_2552
KEGG: rru:Rru_A2122 hypothetical protein.
 
  
 0.800
Xcel_2556
KEGG: rsq:Rsph17025_4047 hypothetical protein.
  
  
 0.565
Xcel_2551
PFAM: Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: gme:Gmet_1390 SAM-binding motif-containing protein.
 
    0.517
Xcel_2557
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.482
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.445
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.