STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2572PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3354 ABC transporter related. (245 aa)    
Predicted Functional Partners:
Xcel_2573
PFAM: ABC-2 type transporter; KEGG: afw:Anae109_1405 ABC-2 type transporter.
 
 
 0.995
Xcel_2587
PFAM: ABC-2 type transporter; KEGG: gsu:GSU1504 ABC transporter permease.
 
 
 0.979
Xcel_2574
Glycosyltransferase-like protein; KEGG: gox:GOX1489 putative glycosyltransferase.
 
  
 0.893
Xcel_0058
PFAM: ABC-2 type transporter; KEGG: bcr:BCAH187_A3467 ABC transporter, efflux permease protein.
  
 
 0.887
Xcel_2575
KEGG: eta:ETA_13410 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like.
  
  
 0.864
Xcel_2571
KEGG: ank:AnaeK_3189 hypothetical protein.
 
     0.814
Xcel_2508
KEGG: hha:Hhal_0964 competence protein F.
   
    0.687
Xcel_2582
PFAM: glycosyl transferase family 2; KEGG: swi:Swit_4001 glycosyl transferase family protein.
 
  
 0.682
Xcel_2576
KEGG: azo:azo0658 hypothetical protein.
       0.576
Xcel_2903
PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_1273 glycosyl transferase, group 1.
 
 
 0.538
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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