STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2591PFAM: glycosyl transferase group 1; KEGG: kpn:KPN_00998 putative glycosyl transferase, group I. (478 aa)    
Predicted Functional Partners:
Xcel_2592
PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_0757 glycosyl transferase family protein.
  
   0.690
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.624
Xcel_2593
KEGG: sus:Acid_4636 hypothetical protein.
       0.623
Xcel_0786
PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; KEGG: gsu:GSU3411 ATP-dependent DNA helicase PcrA, putative.
    
 
 0.622
Xcel_1304
KEGG: rce:RC1_1069 hypothetical protein.
   
 
 0.599
Xcel_1881
1 4-alpha-glucan branching enzyme-like protein; KEGG: aba:Acid345_0241 malto-oligosyltrehalose trehalohydrolase.
  
 0.599
Xcel_2590
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bsu:BSU35760 polyglycerol phosphate assembly/export protein.
  
  
 0.586
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.526
Xcel_2582
PFAM: glycosyl transferase family 2; KEGG: swi:Swit_4001 glycosyl transferase family protein.
 
 
 0.507
Xcel_2560
KEGG: nar:Saro_3237 dTDP-4-dehydrorhamnose 3,5- epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related.
  
  
 0.493
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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