STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2592PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_0757 glycosyl transferase family protein. (235 aa)    
Predicted Functional Partners:
Xcel_2593
KEGG: sus:Acid_4636 hypothetical protein.
 
   
 0.956
Xcel_2576
KEGG: azo:azo0658 hypothetical protein.
 
     0.762
Xcel_2571
KEGG: ank:AnaeK_3189 hypothetical protein.
 
     0.709
Xcel_2570
KEGG: mpt:Mpe_A3162 hypothetical protein.
 
     0.706
Xcel_2591
PFAM: glycosyl transferase group 1; KEGG: kpn:KPN_00998 putative glycosyl transferase, group I.
  
   0.690
Xcel_2590
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bsu:BSU35760 polyglycerol phosphate assembly/export protein.
  
    0.511
Xcel_2594
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: hypothetical protein.
       0.473
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.445
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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