STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2604PFAM: protein of unknown function DUF214; KEGG: eba:ebA6805 hypothetical protein. (871 aa)    
Predicted Functional Partners:
Xcel_2603
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit.
 
 0.978
Xcel_0346
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit.
 
 0.906
Xcel_3057
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_2407 ABC transporter-related protein.
 
 0.903
Xcel_0028
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: gur:Gura_3474 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
 0.873
Xcel_2719
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_3711 ABC transporter related.
 
 0.864
Xcel_2803
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C6690 ABC transporter, ATPase subunit.
 
 
 0.780
Xcel_3157
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_3474 ABC transporter related.
 
 
 0.731
Xcel_1616
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_3234 ABC transporter related.
 
 
 0.704
Xcel_0815
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_3474 ABC transporter related.
 
 
 0.703
Xcel_2822
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_3444 ABC transporter related.
 
 
 0.702
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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