STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2610Hypothetical protein. (170 aa)    
Predicted Functional Partners:
Xcel_2407
Hypothetical protein; KEGG: ank:AnaeK_0563 thermosensitive mutation transmembrane protein, SuhR.
 
     0.690
Xcel_2609
PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dvm:DvMF_1419 signal transduction histidine kinase.
       0.615
Xcel_2550
KEGG: met:M446_5306 hypothetical protein.
  
     0.612
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
     0.601
Xcel_2503
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
  
     0.583
Xcel_2547
KEGG: hypothetical protein.
  
     0.552
Xcel_3034
KEGG: hypothetical protein.
  
     0.547
Xcel_3112
PFAM: regulatory protein TetR; KEGG: pau:PA14_35210 TetR family transcriptional regulator.
  
     0.538
Xcel_0736
KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
  
     0.532
Xcel_0171
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: GH10507 gene product from transcript GH10507- RA.
  
     0.500
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.