STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2616PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: sde:Sde_1318 cellobiose phosphorylase. (827 aa)    
Predicted Functional Partners:
Xcel_0928
PFAM: glycoside hydrolase family 3 domain protein; KEGG: scl:sce2601 Beta-glucosidase.
 
  
 0.939
Xcel_1195
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase.
 
  
 0.932
Xcel_0182
Cellulase; PFAM: glycoside hydrolase family 5; KEGG: bha:BH0603 endo-beta-1,4-glucanase (celulase B); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.928
Xcel_2440
Beta-galactosidase; KEGG: mxa:MXAN_6555 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
Xcel_2614
Beta-galactosidase; KEGG: scl:sce4297 Beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
Xcel_0168
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
    
 0.906
Xcel_2219
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.905
Xcel_1150
PFAM: glycoside hydrolase family 6; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: xfa:XF1267 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
  
 
  0.901
Xcel_0062
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: alpha-glucosidase; K01187 alpha-glucosidase.
   
 
 0.900
Xcel_0236
PFAM: glycoside hydrolase family 6; KEGG: cellobiohydrolase, putative; Belongs to the glycosyl hydrolase family 6.
     
  0.900
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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