STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2623PFAM: Chlorite dismutase; KEGG: bha:BH3825 putative heme peroxidase. (255 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 0.995
Xcel_3250
PFAM: FAD dependent oxidoreductase; KEGG: csa:Csal_0796 protoporphyrinogen oxidase.
 
  
 0.627
Xcel_1890
Hypothetical protein.
 
     0.596
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
     0.518
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.503
Xcel_2007
Response regulator receiver protein; KEGG: bph:Bphy_0469 two component transcriptional regulator.
  
     0.496
Xcel_1924
Hypothetical protein.
  
     0.474
Xcel_2625
Acetyltransferase; KEGG: mno:Mnod_7036 acetyltransferase.
       0.406
Xcel_3254
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: scl:sce0016 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
   
 0.405
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.