STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2645Hypothetical protein. (132 aa)    
Predicted Functional Partners:
Xcel_2644
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; KEGG: bpm:BURPS1710b_1102 putative lipoprotein.
 
   
 0.917
Xcel_2646
rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
       0.773
Xcel_2647
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU06970 hypothetical protein.
       0.480
Xcel_0944
KEGG: afw:Anae109_2050 hypothetical protein.
  
     0.473
Xcel_3064
KEGG: rsq:Rsph17025_3751 hypothetical protein.
  
     0.435
Xcel_2634
KEGG: acp:A2cp1_2377 secretion protein HlyD family protein.
  
     0.432
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.