STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2654PFAM: glycoside hydrolase family 43; KEGG: mxa:MXAN_5247 glycosyl hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family. (299 aa)    
Predicted Functional Partners:
Xcel_2658
KEGG: sus:Acid_0267 hypothetical protein.
     0.944
Xcel_2657
PFAM: Oxidoreductase domain; oxidoreductase domain protein; KEGG: eca:ECA2209 putative oxidoreductase.
 
     0.679
Xcel_2656
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bsu:BSU12380 altronate oxidoreductase.
 
     0.655
Xcel_2655
PFAM: carbohydrate kinase FGGY; KEGG: sus:Acid_3424 carbohydrate kinase, FGGY.
  
  
 0.596
Xcel_2782
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bha:BH1874 alpha-L-arabinosidase.
 
  
 0.506
Xcel_2653
SMART: TIR protein; KEGG: rfr:Rfer_1231 hypothetical protein.
       0.470
Xcel_0411
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0905 L-arabinose transport system (sugar-binding protein).
  
    0.467
Xcel_0037
KEGG: aba:Acid345_2075 hypothetical protein.
  
     0.460
Xcel_1323
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43; KEGG: cja:CJA_3070 beta-xylosidase/alpha-L- arabinfuranosidase, putative, gly43G; Belongs to the glycosyl hydrolase 43 family.
  
     0.456
Xcel_2665
PFAM: glycoside hydrolase family 35; KEGG: ccs:CCNA_02891 beta-galactosidase.
 
  
 0.452
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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