STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2668KEGG: sde:Sde_0054 adenylyl cyclase class- 3/4/guanylyl cyclase. (652 aa)    
Predicted Functional Partners:
Xcel_1153
PFAM: glycoside hydrolase family 48; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: hch:HCH_02465 RTX toxins and related Ca2+- binding protein.
  
     0.613
Xcel_0236
PFAM: glycoside hydrolase family 6; KEGG: cellobiohydrolase, putative; Belongs to the glycosyl hydrolase family 6.
  
     0.566
Xcel_0218
PFAM: glycoside hydrolase family 18; Carbohydrate- binding family V/XII; SMART: chitinase II; Carbohydrate-binding family V/XII; KEGG: smt:Smal_0542 glycoside hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.535
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
       0.510
Xcel_2470
PFAM: chitin-binding domain 3 protein; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: cvi:CV_2592 carbohydrate-binding protein.
 
  
 0.501
Xcel_0933
PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce7548 ABC-type dipeptide transport system, periplasmic component.
  
     0.490
Xcel_2244
PFAM: chitin-binding domain 3 protein; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: cvi:CV_0554 carbohydrate-binding protein.
 
  
 0.478
Xcel_2441
Endo-1,4-beta-xylanase; KEGG: glycosyl hydrolase family 10 protein; PFAM: glycoside hydrolase family 10; cellulose- binding family II; SMART: glycoside hydrolase family 10; cellulose- binding family II.
 
     0.412
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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