STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2674Hypothetical protein; KEGG: shn:Shewana3_1270 major facilitator transporter. (292 aa)    
Predicted Functional Partners:
Xcel_2673
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce2431 Sulfate/thiosulfate import ATP- binding protein CysA.
     0.945
Xcel_0096
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6827 sodium ABC transporter ATP- binding protein NatA.
 
     0.592
Xcel_0379
PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator.
 
    0.495
Xcel_2928
KEGG: nha:Nham_3709 hypothetical protein.
 
  
 0.492
Xcel_2672
PFAM: protein of unknown function DUF1112; KEGG: xfa:XF2760 hypothetical protein.
       0.490
Xcel_1351
PFAM: ABC-2 type transporter; KEGG: rsq:Rsph17025_3253 ABC transporter related.
 
  
 0.463
Xcel_0275
KEGG: scl:sce7370 hypothetical protein.
  
 
 0.446
Xcel_1855
Hypothetical protein; KEGG: bbt:BBta_4512 phosphatidate cytidylyltransferase.
  
 
 0.446
Xcel_0381
Hypothetical protein; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein.
  
     0.442
Xcel_2738
KEGG: hypothetical protein.
  
     0.427
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.