STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2681PFAM: Septum formation initiator; KEGG: hypothetical protein LOC744254. (202 aa)    
Predicted Functional Partners:
Xcel_1286
PFAM: cell division protein FtsQ; Polypeptide- transport-associated domain protein FtsQ-type; KEGG: swi:Swit_3942 polypeptide-transport- associated domain-containing protein.
   
 
 0.893
Xcel_2680
PFAM: protein of unknown function DUF501; KEGG: csa:Csal_3040 hypothetical protein.
       0.779
Xcel_2679
PFAM: Ppx/GppA phosphatase; KEGG: acp:A2cp1_0693 Ppx/GppA phosphatase.
  
  
 0.739
Xcel_1050
Hypothetical protein.
  
     0.670
Xcel_1312
Hypothetical protein; KEGG: met:M446_5885 adenylate/guanylate cyclase.
 
    0.623
Xcel_2491
TIGRFAM: anti-sigma factor; KEGG: mxa:MXAN_6460 hypothetical protein.
  
    0.617
Xcel_1931
Hypothetical protein.
  
     0.519
Xcel_0070
TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: vco:VC0395_A2428 sec-independent translocase.
  
    0.473
Xcel_1064
Hypothetical protein.
  
     0.463
Xcel_0355
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: gsu:GSU2230 DNA polymerase III, delta prime subunit.
 
    0.446
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.