STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2694KEGG: pat:Patl_2044 hypothetical protein. (304 aa)    
Predicted Functional Partners:
Xcel_2693
PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4788 glycosyl transferase family 2.
     0.987
Xcel_2691
KEGG: pde:Pden_0844 glycosyl transferase, family 2.
 
   
 0.933
Xcel_2697
PFAM: O-antigen polymerase; KEGG: azc:AZC_4637 hypothetical protein.
 
  
 0.821
Xcel_2690
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: afw:Anae109_3040 WecB/TagA/CpsF family glycosyl transferase; Belongs to the glycosyltransferase 26 family.
  
  
 0.794
Xcel_2692
PFAM: GMC oxidoreductase; FAD dependent oxidoreductase; KEGG: bra:BRADO2203 hypothetical protein.
       0.773
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.714
Xcel_2701
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH01364 oxidoreductase protein.
 
     0.680
Xcel_2688
KEGG: glo:Glov_1509 transferase hexapeptide repeat containing protein.
 
     0.590
Xcel_1214
Putative CheA signal transduction histidine kinase; PFAM: Excalibur domain protein; KEGG: mgm:Mmc1_2162 TPR repeat-containing protein.
  
     0.519
Xcel_2689
KEGG: hypothetical protein.
       0.481
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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