STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2697PFAM: O-antigen polymerase; KEGG: azc:AZC_4637 hypothetical protein. (419 aa)    
Predicted Functional Partners:
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.980
Xcel_2696
PFAM: lipopolysaccharide biosynthesis protein.
  
  
 0.896
Xcel_2694
KEGG: pat:Patl_2044 hypothetical protein.
 
  
 0.821
Xcel_2691
KEGG: pde:Pden_0844 glycosyl transferase, family 2.
 
  
 0.814
Xcel_2693
PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4788 glycosyl transferase family 2.
 
  
 0.780
Xcel_2701
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH01364 oxidoreductase protein.
 
     0.748
Xcel_3104
PFAM: polysaccharide biosynthesis protein; KEGG: mrd:Mrad2831_0176 polysaccharide biosynthesis protein.
 
  
 0.729
Xcel_2582
PFAM: glycosyl transferase family 2; KEGG: swi:Swit_4001 glycosyl transferase family protein.
  
  
 0.682
Xcel_0868
KEGG: aeh:Mlg_0240 hypothetical protein.
  
  
 0.656
Xcel_2906
KEGG: ade:Adeh_2766 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.576
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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