STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2711PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU09890 hypothetical protein. (305 aa)    
Predicted Functional Partners:
Xcel_2712
ABC-type Na+ efflux pump permease component- like protein; KEGG: scl:sce9075 hypothetical protein.
  
 0.977
Xcel_2603
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit.
 
    
0.855
Xcel_0713
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0826 ABC transporter, ATPase subunit.
 
     
0.783
Xcel_2710
PFAM: regulatory protein TetR; KEGG: mxa:MXAN_5545 transcriptional regulator, TetR family.
       0.642
Xcel_0105
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sit:TM1040_1274 ABC transporter related.
 
     
0.620
Xcel_2713
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: cti:RALTA_A0035 putative transcriptional regulator, MarR family.
       0.598
Xcel_2719
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_3711 ABC transporter related.
 
    
0.541
Xcel_0346
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit.
 
    
0.489
Xcel_2714
PFAM: major facilitator superfamily MFS_1; KEGG: zmo:ZMO1111 ABC transporter.
       0.447
Xcel_3074
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A3688 ABC transporter component.
 
    
0.425
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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