STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2723PFAM: Acetyl xylan esterase; KEGG: mlo:mlr6993 acetyl xylan esterase. (352 aa)    
Predicted Functional Partners:
Xcel_2722
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU07370 hypothetical protein.
       0.528
Xcel_0369
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0482 lipoprotein.
 
     0.519
Xcel_2662
KEGG: bha:BH0482 lipoprotein.
 
     0.468
Xcel_0072
PFAM: aminoglycoside phosphotransferase; KEGG: sme:SMc04360 hypothetical protein.
  
     0.455
Xcel_0382
KEGG: hypothetical protein.
  
     0.452
Xcel_0268
PFAM: glycoside hydrolase family 2 TIM barrel; KEGG: similar to mannosidase, beta A, lysosomal.
 
     0.434
Xcel_2806
PFAM: protein of unknown function DUF214; KEGG: large exoprotein involved in heme utilization or adhesion.
  
     0.434
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.