STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2737Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: vha:VIBHAR_03430 beta-N-hexosaminidase. (530 aa)    
Predicted Functional Partners:
Xcel_0218
PFAM: glycoside hydrolase family 18; Carbohydrate- binding family V/XII; SMART: chitinase II; Carbohydrate-binding family V/XII; KEGG: smt:Smal_0542 glycoside hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.969
Xcel_0110
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: dvl:Dvul_1003 glycoside hydrolase family 3 protein.
    
 0.910
Xcel_1053
PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: ppr:PBPRA0517 putative N,N-diacetylchitobiose phosphorylase.
    
 0.900
Xcel_1099
PFAM: phosphotransferase system PTS EIIB protein; KEGG: bmj:BMULJ_02774 PTS system N- acetylglucosamine-specific IIB component.
  
  
 0.789
Xcel_3203
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: vpa:VP0793 glucose-specific PTS system component.
  
  
 0.782
Xcel_2738
KEGG: hypothetical protein.
       0.773
Xcel_0268
PFAM: glycoside hydrolase family 2 TIM barrel; KEGG: similar to mannosidase, beta A, lysosomal.
 
 
 0.574
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
   
 0.457
Xcel_2442
N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: gdi:GDI2579 putative N-acetylglucosamine-6- phosphate deacetylase.
 
   
 0.447
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
 
   
 0.443
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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