STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2738KEGG: hypothetical protein. (475 aa)    
Predicted Functional Partners:
Xcel_2737
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: vha:VIBHAR_03430 beta-N-hexosaminidase.
       0.773
Xcel_2291
KEGG: scl:sce7916 hypothetical protein.
  
     0.731
Xcel_2503
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
  
    0.717
Xcel_2032
Hypothetical protein; KEGG: ank:AnaeK_2647 putative CheA signal transduction histidine kinase.
  
     0.640
Xcel_0395
KEGG: ZNF219; zinc finger protein 219.
  
     0.629
Xcel_2184
Hypothetical protein; KEGG: sus:Acid_5430 peptidase S9 prolyl oligopeptidase.
  
     0.623
vapC-8
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.612
Xcel_2924
Hypothetical protein.
  
     0.601
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
     0.599
Xcel_2928
KEGG: nha:Nham_3709 hypothetical protein.
 
     0.590
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.