STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2739PFAM: Propeptide PepSY amd peptidase M4; KEGG: preprotein translocase SecG subunit; K03075 preprotein translocase SecG subunit. (211 aa)    
Predicted Functional Partners:
Xcel_2740
PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: bat:BAS3246 lysozyme, putative.
       0.592
Xcel_2737
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: vha:VIBHAR_03430 beta-N-hexosaminidase.
       0.431
Xcel_2738
KEGG: hypothetical protein.
       0.431
Xcel_2741
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rru:Rru_A3172 lysine exporter protein LysE/YggA.
       0.422
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.