STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2749PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein. (306 aa)    
Predicted Functional Partners:
Xcel_2750
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3345 ABC transporter membrane spanning protein.
 
 
0.998
Xcel_2751
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BRA0809 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.995
Xcel_2752
KEGG: bov:BOV_A0760 ABC transporter, periplasmic substrate-binding protein.
 
  
  0.990
fbpC
ABC transporter related protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
  
 0.902
Xcel_0180
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pzu:PHZ_c1203 spermidine/putrescine ABC transporter, ATP-binding protein.
 
  
 0.897
Xcel_3074
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A3688 ABC transporter component.
   
    0.502
Xcel_2210
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: scl:sce8316 competence protein.
  
  
 0.477
Xcel_0188
PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: cvi:CV_2787 ribosome-associated heat shock protein HSP15.
   
    0.465
der
Cytidylate kinase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
   
    0.459
Xcel_2984
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.457
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.