STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2760PFAM: transport system permease protein; KEGG: rce:RC1_3860 hemin transport system permease protein HmuU, putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (361 aa)    
Predicted Functional Partners:
hmuV
ABC transporter related protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.993
Xcel_2759
PFAM: periplasmic binding protein; KEGG: dsh:Dshi_0573 periplasmic binding protein.
 
 
 0.990
Xcel_2307
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_3521 ABC transporter related.
 
 0.949
Xcel_3056
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter related; K02013 iron complex transport system ATP-binding protein.
 
 0.945
Xcel_2174
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit.
 
 0.928
Xcel_1448
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_3149 ABC transporter related.
 
 0.918
Xcel_2309
PFAM: periplasmic binding protein; KEGG: abm:ABSDF1953 iron ABC transporter periplasmic substrate-binding protein.
 
 
 0.868
Xcel_2764
Hypothetical protein; KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein.
 
  
 0.798
Xcel_3055
PFAM: periplasmic binding protein; KEGG: bha:BH1037 iron (III) dicitrate transport system (permease).
 
 
 0.796
Xcel_2763
KEGG: hypothetical protein.
  
    0.794
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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