STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2762KEGG: hypothetical protein. (449 aa)    
Predicted Functional Partners:
Xcel_0231
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bpt:Bpet1203 HlyD family secretion protein.
  
 
 0.916
Xcel_0028
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: gur:Gura_3474 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.901
Xcel_2511
Hypothetical protein; KEGG: scl:sce4824 HlyD family secretion protein.
  
 
 0.837
Xcel_2721
KEGG: ade:Adeh_3797 hypothetical protein.
  
 
 0.837
hmuV
ABC transporter related protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
     
 0.810
Xcel_2759
PFAM: periplasmic binding protein; KEGG: dsh:Dshi_0573 periplasmic binding protein.
     
 0.804
Xcel_2760
PFAM: transport system permease protein; KEGG: rce:RC1_3860 hemin transport system permease protein HmuU, putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.790
Xcel_2763
KEGG: hypothetical protein.
       0.790
Xcel_2509
PFAM: protein of unknown function DUF214; KEGG: cvi:CV_4396 ABC transporter permease.
  
 
 0.628
Xcel_3156
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
  
 
 0.628
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.