STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2765PFAM: protein of unknown function DUF916 cell surface putative; KEGG: class III chitinase ChiA1; K01183 chitinase. (331 aa)    
Predicted Functional Partners:
Xcel_2764
Hypothetical protein; KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein.
 
     0.914
Xcel_1085
KEGG: mrd:Mrad2831_1863 hypothetical protein.
   
   0.696
Xcel_2759
PFAM: periplasmic binding protein; KEGG: dsh:Dshi_0573 periplasmic binding protein.
 
     0.632
hmuV
ABC transporter related protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
     0.556
Xcel_2760
PFAM: transport system permease protein; KEGG: rce:RC1_3860 hemin transport system permease protein HmuU, putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.532
Xcel_2762
KEGG: hypothetical protein.
       0.470
Xcel_2763
KEGG: hypothetical protein.
       0.470
Xcel_1116
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rle:RL3033 hypothetical protein.
  
     0.466
Xcel_2758
PFAM: Haem oxygenase-like; KEGG: HMOX2; heme oxygenase (decycling) 2; K00510 heme oxygenase.
 
     0.407
Xcel_2806
PFAM: protein of unknown function DUF214; KEGG: large exoprotein involved in heme utilization or adhesion.
 
     0.403
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.