STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2794PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: pde:Pden_3114 protein of unknown function DUF21. (340 aa)    
Predicted Functional Partners:
Xcel_2793
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: shl:Shal_2699 hypothetical protein.
 
   
0.916
Xcel_2484
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: mxa:MXAN_4903 putative transporter.
 
   
0.637
Xcel_1858
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: dvu:DVU2148 CBS/transporter associated domain- containing protein.
 
   
0.630
Xcel_2186
PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: gur:Gura_1784 CBS domain-containing protein.
  
     0.611
Xcel_2792
PFAM: regulatory protein TetR; KEGG: acp:A2cp1_2482 transcriptional regulator, TetR family.
       0.532
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
    0.468
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.