STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2803PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C6690 ABC transporter, ATPase subunit. (238 aa)    
Predicted Functional Partners:
Xcel_2806
PFAM: protein of unknown function DUF214; KEGG: large exoprotein involved in heme utilization or adhesion.
 
   0.917
Xcel_3156
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
   0.902
Xcel_2805
PFAM: protein of unknown function DUF214; KEGG: GK24882 gene product from transcript GK24882- RA.
  
   0.868
Xcel_0100
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
 
 
    0.809
Xcel_2804
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvy:VVA1496 peptide ABC transporter ATPase.
 
    
0.798
Xcel_1615
PFAM: protein of unknown function DUF214; KEGG: dar:Daro_1168 hypothetical protein.
   0.793
Xcel_2604
PFAM: protein of unknown function DUF214; KEGG: eba:ebA6805 hypothetical protein.
 
 
 0.780
Xcel_0265
KEGG: oan:Oant_4612 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.754
Xcel_0816
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
   0.736
Xcel_3320
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6967 ABC transporter related.
 
    
0.670
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.