STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2839PFAM: OsmC family protein; KEGG: sme:SM_b21303 hypothetical protein. (164 aa)    
Predicted Functional Partners:
Xcel_2840
KEGG: spc:Sputcn32_2914 hypothetical protein.
 
     0.943
Xcel_2197
KEGG: scl:sce8934 hypothetical protein.
  
     0.681
Xcel_1403
PFAM: ANTAR domain protein; KEGG: met:M446_0827 signal transduction histidine kinase.
  
     0.610
Xcel_0395
KEGG: ZNF219; zinc finger protein 219.
  
     0.565
Xcel_2838
KEGG: scl:sce0026 hypothetical protein.
       0.543
Xcel_1401
Putative PAS/PAC sensor protein; PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: met:M446_3030 multi-sensor hybrid histidine kinase.
  
     0.481
Xcel_2942
Hypothetical protein; KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like proteiin.
  
     0.472
Xcel_2455
KEGG: msl:Msil_1305 hypothetical protein.
  
     0.469
Xcel_2841
Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: scl:sce6239 hypothetical protein.
 
     0.468
Xcel_2212
Hypothetical protein.
  
     0.447
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.