STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2845PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; regulatory protein Crp; KEGG: sus:Acid_2178 DtxR family iron dependent repressor. (240 aa)    
Predicted Functional Partners:
Xcel_2846
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
     
 0.727
Xcel_2171
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: mxa:MXAN_3702 transcriptional regulator, Fur family; Belongs to the Fur family.
  
  
 0.675
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: bbr:BB4409 glutamate-1-semialdehyde 2,1- aminomutase.
      
 0.621
Xcel_2758
PFAM: Haem oxygenase-like; KEGG: HMOX2; heme oxygenase (decycling) 2; K00510 heme oxygenase.
      
 0.612
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
   
  
 0.581
Xcel_2844
PFAM: NLP/P60 protein; KEGG: NLP/P60 protein.
       0.549
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.534
Xcel_0732
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
    
   0.534
Xcel_3313
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: nis:NIS_1150 peroxide stress regulator; Belongs to the Fur family.
  
  
 0.530
Xcel_2764
Hypothetical protein; KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein.
      
 0.518
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.