STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2903PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_1273 glycosyl transferase, group 1. (358 aa)    
Predicted Functional Partners:
Xcel_2902
PFAM: glycosyl transferase family 2; KEGG: glycosyltransferase protein.
 
    0.803
Xcel_2904
KEGG: bcm:Bcenmc03_4245 hypothetical protein.
  
    0.782
Xcel_2901
Hypothetical protein; KEGG: xca:xccb100_3351 conserved surface carbohydrate biosynthesis protein.
       0.773
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.699
Xcel_2906
KEGG: ade:Adeh_2766 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.687
Xcel_2900
PFAM: glycosyl transferase family 2; KEGG: stm:STM3707 glycosyl transferase.
 
 
 0.652
Xcel_0786
PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; KEGG: gsu:GSU3411 ATP-dependent DNA helicase PcrA, putative.
    
 
 0.622
Xcel_1304
KEGG: rce:RC1_1069 hypothetical protein.
   
 
 0.599
Xcel_0992
Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; KEGG: hypothetical protein.
 
  
 0.570
Xcel_2572
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3354 ABC transporter related.
 
 
 0.538
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.