STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2926KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase. (501 aa)    
Predicted Functional Partners:
Xcel_2854
Capsular exopolysaccharide family; KEGG: pca:Pcar_1464 uncharacterized exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.999
Xcel_2887
Capsular exopolysaccharide family; KEGG: pca:Pcar_1539 uncharacterized exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.999
Xcel_2700
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: lch:Lcho_1398 glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.992
Xcel_2697
PFAM: O-antigen polymerase; KEGG: azc:AZC_4637 hypothetical protein.
  
  
 0.980
Xcel_2582
PFAM: glycosyl transferase family 2; KEGG: swi:Swit_4001 glycosyl transferase family protein.
 
  
 0.959
Xcel_2690
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: afw:Anae109_3040 WecB/TagA/CpsF family glycosyl transferase; Belongs to the glycosyltransferase 26 family.
   
 0.936
Xcel_2583
PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: waaV; lipooligosaccharide biosynthesis glycosyltransferase.
 
  
 0.910
Xcel_0992
Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; KEGG: hypothetical protein.
  
  
 0.909
Xcel_2557
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.889
Xcel_2559
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.888
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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