STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2933KEGG: SNF2 superfamily protein. (689 aa)    
Predicted Functional Partners:
Xcel_2934
Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: scl:sce5472 chloroplast membrane-associated 30 kD protein.
     0.952
Xcel_2490
KEGG: mms:mma_0681 acyl-CoA thioesterase I precursor.
 
 
 0.770
Xcel_2945
PFAM: lipolytic protein G-D-S-L family; KEGG: bcr:BCAH187_A2589 putative lipase/acylhydrolase.
  
 
 0.769
Xcel_3064
KEGG: rsq:Rsph17025_3751 hypothetical protein.
  
 
 0.769
Xcel_2853
PFAM: SCP-like extracellular; KEGG: pla:Plav_0460 SCP-like extracellular.
  
    0.695
Xcel_2503
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
 
     0.562
Xcel_3051
KEGG: hypothetical protein.
 
 
 0.543
Xcel_2738
KEGG: hypothetical protein.
  
   
 0.518
Xcel_2291
KEGG: scl:sce7916 hypothetical protein.
 
    0.478
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
     0.478
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.