STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2934Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: scl:sce5472 chloroplast membrane-associated 30 kD protein. (256 aa)    
Predicted Functional Partners:
Xcel_0709
Putative signal transduction histidine kinase; PFAM: PspC domain protein; ATP-binding region ATPase domain protein; KEGG: sus:Acid_1604 integral membrane sensor signal transduction histidine kinase.
  
 
 0.982
Xcel_2933
KEGG: SNF2 superfamily protein.
     0.952
Xcel_0060
PFAM: PspC domain protein; KEGG: hne:HNE_3296 phage shock protein C.
  
 
 0.906
Xcel_0708
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: swi:Swit_2762 hypothetical protein.
  
 
 0.906
Xcel_1152
Putative PAS/PAC sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; KEGG: scl:sce1424 HTH-type transcriptional repressor PurR.
    
 
 0.696
Xcel_1912
PFAM: band 7 protein; SMART: band 7 protein; KEGG: bcy:Bcer98_0488 flotillin domain-containing protein.
  
  
 0.606
Xcel_0213
KEGG: sus:Acid_1228 hypothetical protein.
  
  
 0.531
Xcel_0077
GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; regulatory protein LuxR; histidine kinase dimerisation and phosphoacceptor region; SMART: GAF domain protein; response regulator receiver; ATP-binding region ATPase domain protein; regulatory protein LuxR; KEGG: ade:Adeh_1998 periplasmic sensor signal transduction histidine kinase.
  
  
 0.498
Xcel_0944
KEGG: afw:Anae109_2050 hypothetical protein.
  
    0.408
Xcel_2511
Hypothetical protein; KEGG: scl:sce4824 HlyD family secretion protein.
  
    0.401
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.