STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2936KEGG: mxa:MXAN_6701 hypothetical protein. (186 aa)    
Predicted Functional Partners:
Xcel_2937
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH3157 two-component response regulator involved in phosphate regulation.
       0.547
Xcel_2938
Histidine kinase; KEGG: gme:Gmet_3382 heavy metal sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
       0.547
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.540
Xcel_1426
Hypothetical protein.
  
     0.512
Xcel_2500
Hypothetical protein.
  
     0.479
Xcel_1030
Hypothetical protein.
  
     0.476
Xcel_1028
PFAM: TadE family protein; KEGG: dvl:Dvul_0051 TadE family protein.
  
     0.467
Xcel_2935
PFAM: glutamine amidotransferase class-I; KEGG: glo:Glov_1063 glutamine amidotransferase class-I.
       0.441
Xcel_2939
KEGG: pau:PA14_45090 hypothetical protein.
       0.407
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.