STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3103PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4802 glycosyl transferase family 2. (338 aa)    
Predicted Functional Partners:
Xcel_3104
PFAM: polysaccharide biosynthesis protein; KEGG: mrd:Mrad2831_0176 polysaccharide biosynthesis protein.
  
 0.891
Xcel_3105
PFAM: glycosyl transferase group 1; KEGG: mrd:Mrad2831_4619 glycosyl transferase group 1.
       0.777
Xcel_2926
KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.664
Xcel_2906
KEGG: ade:Adeh_2766 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.655
Xcel_3102
PFAM: glycosyl transferase family 14; KEGG: bbt:BBta_1001 hypothetical protein.
       0.623
Xcel_3101
Hypothetical protein.
       0.502
Xcel_3106
KEGG: mxa:MXAN_6313 putative lipoprotein.
       0.466
Xcel_2701
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH01364 oxidoreductase protein.
  
     0.460
Xcel_2587
PFAM: ABC-2 type transporter; KEGG: gsu:GSU1504 ABC transporter permease.
 
  
 0.448
Xcel_2693
PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4788 glycosyl transferase family 2.
 
    0.444
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.