STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3105PFAM: glycosyl transferase group 1; KEGG: mrd:Mrad2831_4619 glycosyl transferase group 1. (566 aa)    
Predicted Functional Partners:
Xcel_3104
PFAM: polysaccharide biosynthesis protein; KEGG: mrd:Mrad2831_0176 polysaccharide biosynthesis protein.
     
 0.798
Xcel_3103
PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4802 glycosyl transferase family 2.
       0.777
Xcel_0359
KEGG: abo:ABO_1591 alpha/beta fold family hydrolase.
    
 0.768
Xcel_0099
Hypothetical protein.
   
  0.642
Xcel_3102
PFAM: glycosyl transferase family 14; KEGG: bbt:BBta_1001 hypothetical protein.
       0.629
Xcel_3101
Hypothetical protein.
       0.502
Xcel_3106
KEGG: mxa:MXAN_6313 putative lipoprotein.
       0.466
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.