STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3131PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcr:BCAH187_A3468 ABC transporter, ATP- binding protein. (257 aa)    
Predicted Functional Partners:
Xcel_3132
PFAM: ABC-2 type transporter; KEGG: bcz:BCZK3149 ABC transporter efflux permease; daunorubicin resistance transmembrane protein.
  
 0.969
Xcel_2950
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
 
     
0.899
Xcel_1351
PFAM: ABC-2 type transporter; KEGG: rsq:Rsph17025_3253 ABC transporter related.
  
 0.855
Xcel_3137
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
    0.798
Xcel_0058
PFAM: ABC-2 type transporter; KEGG: bcr:BCAH187_A3467 ABC transporter, efflux permease protein.
     0.775
Xcel_3130
KEGG: swp:swp_0175 lipoprotein, putative.
       0.773
Xcel_3129
Hypothetical protein; KEGG: GG18790 gene product from transcript GG18790- RA.
       0.675
Xcel_0105
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sit:TM1040_1274 ABC transporter related.
 
     
0.631
Xcel_2822
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_3444 ABC transporter related.
 
    
0.630
Xcel_1354
PFAM: ABC-2 type transporter; KEGG: scl:sce5572 putative integral membrane transport protein.
 
  
 0.546
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.