STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3139PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rpe:RPE_1200 anti-sigma-factor antagonist. (140 aa)    
Predicted Functional Partners:
Xcel_3140
Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein.
  
 
 0.967
Xcel_1263
PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: gbm:Gbem_0731 response regulator receiver modulated serine phosphatase.
  
 
 0.809
Xcel_2746
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
 
 0.757
Xcel_2857
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sat:SYN_02357 anti-sigma regulatory factor.
  
 
 0.757
Xcel_2856
Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; Cache domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; KEGG: glo:Glov_0709 protein serine/threonine phosphatase.
  
 
 0.625
Xcel_2748
Protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; KEGG: gbm:Gbem_0975 putative PAS/PAC sensor protein.
  
 
 0.587
Xcel_3278
Protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: mag:amb3520 serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.587
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.565
Xcel_0767
Hypothetical protein; KEGG: GI17572 gene product from transcript GI17572- RA.
   
    0.485
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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