STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3151PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1312 binding-protein-dependent transport systems inner membrane component. (316 aa)    
Predicted Functional Partners:
Xcel_3152
PFAM: extracellular solute-binding protein family 5; KEGG: sil:SPO0101 peptide/opine/nickel uptake ABC transporter periplasmic substrate-binding protein.
   0.994
Xcel_3149
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rsq:Rsph17025_3273 acetamidase/formamidase; Belongs to the ABC transporter superfamily.
 
 0.952
Xcel_3150
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
 
0.948
Xcel_1849
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A1340 oligopeptide ABC transporter, permease protein.
 
 0.925
Xcel_3167
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0469 ABC transporter, permease.
 
 0.925
Xcel_0954
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1646 ABC transporter, permease protein.
 
 0.901
Xcel_0959
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1833 binding-protein-dependent transport systems inner membrane component.
 
 0.894
Xcel_0264
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component.
 
 0.872
Xcel_1847
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bsu:BSU11470 oligopeptide ABC transporter ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 0.869
Xcel_3169
PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa0466 ABC transporter, periplasmic solute-binding protein.
   0.867
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.