STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3187NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: tcx:Tcr_0063 putative monovalent cation/H+ antiporter subunit A. (979 aa)    
Predicted Functional Partners:
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.999
Xcel_1841
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: sse:Ssed_3665 NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.999
Xcel_1845
PFAM: cation antiporter; KEGG: smd:Smed_0611 putative monovalent cation/H+ antiporter subunit E.
  
 
 0.999
Xcel_1846
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rru:Rru_A1635 putative monovalent cation/H+ antiporter subunit D.
 
 
0.999
Xcel_3182
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: hha:Hhal_2029 monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.999
Xcel_3183
PFAM: multiple resistance and pH regulation protein F; KEGG: mnhF; Na+/H+ antiporter; K05570 multicomponent Na+:H+ antiporter subunit F.
 
 
 0.999
Xcel_3184
Multisubunit Na+/H+ antiporter MnhE subunit- like protein; KEGG: mnhE; Na+/H+ antiporter; K05569 multicomponent Na+:H+ antiporter subunit E.
 
 
 0.999
Xcel_3185
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: scl:sce1933 putative Na(+)/H(+) antiporter subunit D.
 
0.999
Xcel_3186
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: tmz:Tmz1t_1111 NADH-ubiquinone oxidoreductase chain 4L.
 
 0.999
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.998
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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