STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3188Hypothetical protein. (371 aa)    
Predicted Functional Partners:
Xcel_3187
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: tcx:Tcr_0063 putative monovalent cation/H+ antiporter subunit A.
       0.789
Xcel_3182
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: hha:Hhal_2029 monovalent cation/proton antiporter, MnhG/PhaG subunit.
       0.781
Xcel_3183
PFAM: multiple resistance and pH regulation protein F; KEGG: mnhF; Na+/H+ antiporter; K05570 multicomponent Na+:H+ antiporter subunit F.
       0.781
Xcel_3184
Multisubunit Na+/H+ antiporter MnhE subunit- like protein; KEGG: mnhE; Na+/H+ antiporter; K05569 multicomponent Na+:H+ antiporter subunit E.
       0.781
Xcel_3185
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: scl:sce1933 putative Na(+)/H(+) antiporter subunit D.
       0.779
Xcel_3186
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: tmz:Tmz1t_1111 NADH-ubiquinone oxidoreductase chain 4L.
       0.779
dcd
Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.579
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.