STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3193KEGG: bcb:BCB4264_A4969 hypothetical protein. (231 aa)    
Predicted Functional Partners:
Xcel_0461
Hypothetical protein.
  
     0.695
Xcel_3226
KEGG: dac:Daci_3662 Ig family protein.
  
     0.646
Xcel_3343
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: tbd:Tbd_2736 ArsR family transcriptional regulator.
  
     0.580
Xcel_1915
Hypothetical protein.
  
     0.538
Xcel_3192
KEGG: mxa:MXAN_6363 hypothetical protein.
       0.533
Xcel_0213
KEGG: sus:Acid_1228 hypothetical protein.
  
     0.531
Xcel_0462
KEGG: hypothetical protein.
  
     0.528
Xcel_1198
Hypothetical protein; KEGG: bpd:BURPS668_A0869 LasA protease precursor.
  
     0.526
Xcel_1981
PFAM: RDD domain containing protein; KEGG: aav:Aave_4623 RDD domain containing protein.
  
     0.521
Xcel_0090
PFAM: asparagine synthase; KEGG: mag:amb0105 asparagine synthase.
  
     0.491
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.