STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3246Hypothetical protein. (278 aa)    
Predicted Functional Partners:
Xcel_1513
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: ank:AnaeK_1219 methyltransferase type 11.
  
     0.680
leuS
TIGRFAM: leucyl-tRNA synthetase; KEGG: hypothetical protein; K01869 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.650
Xcel_3245
PFAM: glycosyl transferase family 2; KEGG: bha:BH2769 dolichyl-phosphate mannose synthase.
       0.598
Xcel_2493
PFAM: DoxX family protein; KEGG: oca:OCAR_6332 DoxX.
  
     0.585
Xcel_3247
KEGG: rso:RSc3367 hypothetical protein; Belongs to the CoA-transferase III family.
       0.548
Xcel_2550
KEGG: met:M446_5306 hypothetical protein.
  
     0.544
Xcel_3364
Hypothetical protein; KEGG: GH15499 gene product from transcript GH15499- RA.
  
     0.490
Xcel_3087
Hypothetical protein.
  
     0.471
Xcel_0985
PFAM: Phosphoesterase HXTX; KEGG: bcy:Bcer98_0945 hypothetical protein.
  
     0.449
Xcel_1661
Hypothetical protein.
  
     0.438
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.