STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3258PFAM: Heavy metal transport/detoxification protein; KEGG: rso:RSc3349 hypothetical protein. (160 aa)    
Predicted Functional Partners:
Xcel_3259
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bpy:Bphyt_6893 heavy metal translocating P- type ATPase.
  
 
 0.990
Xcel_3257
PFAM: protein of unknown function DUF156; KEGG: xau:Xaut_3092 hypothetical protein.
  
  
 0.865
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.612
Xcel_1641
PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; KEGG: bte:BTH_II0944 mulitcopper oxidase domain- containing protein.
  
 
 0.592
Xcel_1970
PFAM: protein of unknown function DUF156; KEGG: sat:SYN_00719 putative cytoplasmic protein.
 
  
 0.481
Xcel_3270
PFAM: copper resistance protein CopC; KEGG: bra:BRADO4155 copper resistance protein.
 
   
 0.441
Xcel_3256
Hypothetical protein; KEGG: GA25820 gene product from transcript GA25820- RA.
       0.438
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
 
 0.429
Xcel_1791
PFAM: Ferritin Dps family protein; KEGG: pha:PSHAa2456 stress response DNA-binding protein Dps; Belongs to the Dps family.
  
  
 0.410
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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