STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3259TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bpy:Bphyt_6893 heavy metal translocating P- type ATPase. (884 aa)    
Predicted Functional Partners:
Xcel_3258
PFAM: Heavy metal transport/detoxification protein; KEGG: rso:RSc3349 hypothetical protein.
  
 
 0.990
Xcel_3257
PFAM: protein of unknown function DUF156; KEGG: xau:Xaut_3092 hypothetical protein.
 
  
 0.791
Xcel_1641
PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; KEGG: bte:BTH_II0944 mulitcopper oxidase domain- containing protein.
 
  
 0.734
Xcel_1726
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.545
Xcel_3334
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mpo:Mpop_4086 cation diffusion facilitator family transporter.
  
  
 0.483
Xcel_1647
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: tmz:Tmz1t_1159 ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
 
0.477
pgk
PFAM: phosphoglycerate kinase; KEGG: bcz:BCZK4827 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.454
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.442
Xcel_2083
PFAM: Phosphoglycerate mutase; ribonuclease H; KEGG: mxa:MXAN_5728 ribonuclease H.
 
  
 0.412
Xcel_1970
PFAM: protein of unknown function DUF156; KEGG: sat:SYN_00719 putative cytoplasmic protein.
 
  
 0.405
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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