STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3284KEGG: rlt:Rleg2_1526 hypothetical protein. (234 aa)    
Predicted Functional Partners:
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
       0.689
Xcel_1187
PFAM: protein of unknown function DUF624; KEGG: hypothetical protein.
  
     0.555
Xcel_0699
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_1921 protein of unknown function DUF214.
  
     0.554
Xcel_1107
PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: hypothetical protein; K07443 methylated-DNA- protein-cysteine methyltransferase related protein.
 
     0.529
Xcel_1188
PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein.
  
     0.520
Xcel_0462
KEGG: hypothetical protein.
  
     0.483
Xcel_0339
PFAM: protein of unknown function DUF664.
 
     0.481
Xcel_3286
PFAM: NAD-dependent epimerase/dehydratase; short- chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; dTDP-4- dehydrorhamnose reductase; KEGG: mpo:Mpop_1230 NAD-dependent epimerase/dehydratase.
       0.472
Xcel_2435
KEGG: gdi:GDI0760 hypothetical protein.
  
     0.459
Xcel_2374
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase.
  
     0.419
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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