STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3296PFAM: protein of unknown function DUF664. (223 aa)    
Predicted Functional Partners:
Xcel_3295
KEGG: mex:Mext_0984 beta-lactamase-like protein.
       0.636
Xcel_0229
Hypothetical protein.
  
     0.529
Xcel_0140
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swd:Swoo_1852 hypothetical protein.
 
     0.517
Xcel_3297
PFAM: Endoribonuclease L-PSP; KEGG: mlo:mll4506 hypothetical protein.
       0.501
Xcel_3294
Hypothetical protein; KEGG: acp:A2cp1_3600 serine/threonine protein kinase with WD40 repeats.
       0.459
Xcel_1976
KEGG: rlt:Rleg2_1526 hypothetical protein.
 
     0.453
Xcel_3298
Hypothetical protein.
 
   
 0.410
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.