STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_3319PFAM: ABC-2 type transporter; KEGG: sus:Acid_6966 ABC-2 type transporter. (267 aa)    
Predicted Functional Partners:
Xcel_3320
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6967 ABC transporter related.
 
    0.958
Xcel_3322
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3493 ABC transporter ATP-binding protein.
 
    0.787
Xcel_0608
PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family.
  
  
  0.722
Xcel_3323
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcz:BCZK2634 GntR family transcriptional regulator.
       0.709
Xcel_3321
KEGG: hypothetical protein.
       0.675
Xcel_0609
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_1597 ABC transporter, ATP-binding protein.
 
    0.671
Xcel_1355
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_1815 ABC transporter, ATP-binding protein, putative.
 
    0.563
Xcel_3317
PFAM: aminoglycoside phosphotransferase; KEGG: dsh:Dshi_1990 aminoglycoside phosphotransferase.
 
     0.534
Xcel_0262
PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce4302 ABC-type dipeptide transport system, periplasmic component.
  
  
  0.475
Xcel_3324
Hypothetical protein; KEGG: bur:Bcep18194_B1758 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein.
       0.467
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.